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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825712.1_cds_XP_016502416.1_16061
CDS Infomation

[gene=LOC107820616] [db_xref=GeneID:107820616] [protein=calcium-binding protein CAST-like] [protein_id=XP_016502416.1] [location=complement(31437..32045)] [gbkey=CDS]
Sequence

ATGGGATCAGTAGGTGACAATAATGGAGTACAGGACGAGTGTAAACAGAGCCTTACCAGA
GGCAAACTTAAGTCTTCTTCCTCATCGTCGTTCCGGCTTCGAAGTCCGAGCCTCAATTCA
ATTCGTCTTCGTCGGATCTTCGACGTGTTTGACAGAAACCATGACAGTTTGATCAGCGTT
GACGAACTTAGTCAAGCGGTTAATTTGCTAGGGTTAGATGCCGATCAATCGGAAATTGAA
TCAATGGTGAGATCATACATCAAGTCCGGAAACAACGGCCTTAGATTCGAAGATTTCGAG
GCTCTACATCGCTCACTCGACGATGTTTTTTTCGGGTCAAAATATGAAGATAAGATCGGA
TTGGATCAGGATCCGGATCAGGACGAAGTGGATCTGAAGGATGCGTTTAACGTGTTTGAT
GAGAACGGCGACGGTTTTATATCGGCGAAGGAATTACAGGCTGTACTAGAGAAACTGGGA
TTGCCTGAAGGAAACGAAATTGATAGAGTGGAGATGATGATTTCATCAGTTGACAAAGAT
CACGATGGCCAAGTTGATTTCGTTGAATTCAAGGATATGATGCGCACTGTTATTGTTCCT
TCTTCATAA

Peptide Sequence

PEP ID

XP_016502416.1
PEP Infomation

PREDICTED: calcium-binding protein CAST-like [Nicotiana tabacum]
Sequence

MGSVGDNNGVQDECKQSLTRGKLKSSSSSSFRLRSPSLNSIRLRRIFDVFDRNHDSLISV
DELSQAVNLLGLDADQSEIESMVRSYIKSGNNGLRFEDFEALHRSLDDVFFGSKYEDKIG
LDQDPDQDEVDLKDAFNVFDENGDGFISAKELQAVLEKLGLPEGNEIDRVEMMISSVDKD
HDGQVDFVEFKDMMRTVIVPSS

Transcript Sequence

Gene sequence data has not been registered.